PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC050517.40
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 489aa    MW: 54287.1 Da    PI: 7.7743
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC050517.40genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.98.4e-09306348754
                   HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
           HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     Er+RR ri++++ +Lr+l+P+ +      K++  +iL  A eYI +L
  EcC050517.40 306 VTERKRRTRIKEGLYTLRSLVPNiS------KMDMTSILGDAAEYIVNL 348
                   46*********************66......***************777 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.49E-14298363IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.98E-10298351No hitNo description
PROSITE profilePS5088813.668299348IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.7E-8305354IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.6E-6306348IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.1E-13306368IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    Send to blast
MRALQRSLAW LRPLVDSAAW DYAVVWKLGS LSGSGAAAEE EEERRRRIEA RRRQGGGARR  60
APPAALQGPP RSAPREDQSV PGPRPLPFFS PSLFWVSVAL PFSRSKGCEE MMPDCVFFGQ  120
DPRRGGDIEP AQEFTGTSVL ISVVGGIVEL FSAKHMPEEP LEKEMMMTWS LFLREAVNAG  180
ICDLSIDELL IQEYFKLYPS PLHLSGLDPG LPQLPTGTES SNYPEGSSSS SDLTTNEYPS  240
FDLHNILGYL SQAGLMKQSV VESMESKDSK SLSKQTNLSG CHVGSAKRKG VDKQQEGGKC  300
QAKNLVTERK RRTRIKEGLY TLRSLVPNIS KMDMTSILGD AAEYIVNLET EMRKLKEELE  360
KSEKELCRLK DTDSKSLARS VGHGCSKSLA EKLDTWEISR LTSKTNSKAQ VEVNQIGNGD  420
FLVKILMSQK HGWFTGMMDG INSLGYTVVD ANVTTLNGKV LANLMLEVRY ANILMRILWQ  480
LRVITEFLS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010026676.10.0PREDICTED: transcription factor bHLH90-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM69852742
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16910.12e-17bHLH family protein